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Search by protein name, UniProt number, IPI number, or 15 AA P-site sequence.
Updated November 2019
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Protein Info
Short Name:
YBX1
Full Name:
Nuclease-sensitive element-binding protein 1
Alias:
BP-8; CBF-A; CCAAT-binding transcription factor I subunit A; CSDA2; CSDB; DBPB; DNA-binding protein B; EFI-A; Enhancer factor I subunit A; MDR-NF1; MSY-1; NSEP1; NSEP-1; Nuclease sensitive element binding protein 1; Y box binding protein 1; Y box binding protein-1; YB1; Y-box transcription factor; YBOX1; Y-box-binding protein 1
Type:
RNA processing; Transcription factor
Mass (Da):
35924
Number AA:
324
UniProt ID:
P67809
International Prot ID:
IPI00031812
Sequence:
Retrieve full protein sequence
GO Terms
External Links
Internal Links
Cellular Component:
GO:0070937
GO:0005634
GO:0030529
Uniprot
OncoNet
Molecular Function:
GO:0003723
GO:0003690
GO:0005515
PhosphoSite+
KinaseNET
Biological Process:
GO:0070934
GO:0000398
GO:0006355
Phosida
TranscriptoNet
STRING
Kinexus Products
Info Box
A variety of parameters were considered in the selection of putative P-sites. Confirmed P-Sites have lower Hydrophobicity Scores. The P-site Similarity Score is lower the more that it resembles typical confirmed corresponding P-Ser, P-Thr or P-Tyr sites. The Maximum KInase Score provides the calculated score for highest match of 500 human protein kinases for the amino acid sequence surrounding the target P-site as determined with Kinase Substrate Predictor V2. The Sum KInase Score provides the additive sum of the positive individual Kinase Substrate Predictor V2 scores from 500 human protein kinases. The Conservation Score is the average of the percent similarity of the human P-site with the equivalent P-site in 20 other diverse species. Click the coloured buttons below to retrieve this and other information in the Info Box, or click the orange buttons for relevant links.
Phosphosites
-7
-6
-5
-4
-3
-2
-1
0
1
2
3
4
5
6
7
Expt. conf.
Effect
Kinase
PPase
Kinexus Products
Ref.
Evol.
Kinase Pred.
P-site Match
Site 1
S2
_
_
_
_
_
_
M
S
S
E
A
E
T
Q
Q
Site 2
S3
_
_
_
_
_
M
S
S
E
A
E
T
Q
Q
P
Site 3
T7
_
M
S
S
E
A
E
T
Q
Q
P
P
A
A
P
Site 4
T25
P
A
L
S
A
A
D
T
K
P
G
T
T
G
S
Site 5
S32
T
K
P
G
T
T
G
S
G
A
G
S
G
G
P
Site 6
S36
T
T
G
S
G
A
G
S
G
G
P
G
G
L
T
Site 7
T43
S
G
G
P
G
G
L
T
S
A
A
P
A
G
G
Site 8
S44
G
G
P
G
G
L
T
S
A
A
P
A
G
G
D
Site 9
Y72
W
F
N
V
R
N
G
Y
G
F
I
N
R
N
D
Site 10
T80
G
F
I
N
R
N
D
T
K
E
D
V
F
V
H
Site 11
Y99
K
K
N
N
P
R
K
Y
L
R
S
V
G
D
G
Site 12
S102
N
P
R
K
Y
L
R
S
V
G
D
G
E
T
V
Site 13
T108
R
S
V
G
D
G
E
T
V
E
F
D
V
V
E
Site 14
S136
G
G
V
P
V
Q
G
S
K
Y
A
A
D
R
N
Site 15
Y138
V
P
V
Q
G
S
K
Y
A
A
D
R
N
H
Y
Site 16
Y145
Y
A
A
D
R
N
H
Y
R
R
Y
P
R
R
R
Site 17
Y148
D
R
N
H
Y
R
R
Y
P
R
R
R
G
P
P
Site 18
Y158
R
R
G
P
P
R
N
Y
Q
Q
N
Y
Q
N
S
Site 19
Y162
P
R
N
Y
Q
Q
N
Y
Q
N
S
E
S
G
E
Site 20
S165
Y
Q
Q
N
Y
Q
N
S
E
S
G
E
K
N
E
Site 21
S167
Q
N
Y
Q
N
S
E
S
G
E
K
N
E
G
S
Site 22
S174
S
G
E
K
N
E
G
S
E
S
A
P
E
G
Q
Site 23
S176
E
K
N
E
G
S
E
S
A
P
E
G
Q
A
Q
Site 24
Y188
Q
A
Q
Q
R
R
P
Y
R
R
R
R
F
P
P
Site 25
Y196
R
R
R
R
F
P
P
Y
Y
M
R
R
P
Y
G
Site 26
Y197
R
R
R
F
P
P
Y
Y
M
R
R
P
Y
G
R
Site 27
Y202
P
Y
Y
M
R
R
P
Y
G
R
R
P
Q
Y
S
Site 28
Y208
P
Y
G
R
R
P
Q
Y
S
N
P
P
V
Q
G
Site 29
S209
Y
G
R
R
P
Q
Y
S
N
P
P
V
Q
G
E
Site 30
Y238
R
P
V
R
Q
N
M
Y
R
G
Y
R
P
R
F
Site 31
Y241
R
Q
N
M
Y
R
G
Y
R
P
R
F
R
R
G
Site 32
T271
K
E
N
Q
G
D
E
T
Q
G
Q
Q
P
P
Q
Site 33
Y281
Q
Q
P
P
Q
R
R
Y
R
R
N
F
N
Y
R
Site 34
Y287
R
Y
R
R
N
F
N
Y
R
R
R
R
P
E
N
Site 35
S313
A
D
P
P
A
E
N
S
S
A
P
E
A
E
Q
Site 36
S314
D
P
P
A
E
N
S
S
A
P
E
A
E
Q
G
Legend
Confirmed in mammals
Confirmed in related proteins or other species
Predicted by Kinexus P-Site Prediction algorithm
No data/link available
Link available
Products available
2019 Kinexus Bioinformatics Corporation